TC bogus Program received signal SIGABRT

Any issues with the actual running of the WRF.

TC bogus Program received signal SIGABRT

Postby lauryrenac » Fri May 25, 2018 8:11 am

I am trying to use tc.exe but i get the error below:

Code: Select all
---> TC: Processing storm number=   1
         Storm center lat=  15.60 lon=   89.00.
         Storm center grid position (x,y)=  57.33 64.25.
         Storm max wind (m/s) and max radius (m)= 28.39 15000.00.
         Estimated central press dev (mb)= 40.00.
 nstrm     15000.0000       57.3308105       64.2481689   
         Bogus storm number   1 completed.
*** Error in `./tc.exe': free(): invalid pointer: 0x000055ff74db57f0 ***
======= Backtrace: =========
/lib/x86_64-linux-gnu/libc.so.6(+0x70bfb)[0x7f45c5857bfb]
/lib/x86_64-linux-gnu/libc.so.6(+0x76fc6)[0x7f45c585dfc6]
/lib/x86_64-linux-gnu/libc.so.6(+0x7780e)[0x7f45c585e80e]
./tc.exe(+0x2dd25)[0x55ff6816fd25]
./tc.exe(+0x2ea32)[0x55ff68170a32]
./tc.exe(+0x2fae8)[0x55ff68171ae8]
./tc.exe(+0xb14a)[0x55ff6814d14a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf1)[0x7f45c58072e1]
./tc.exe(+0xb21a)[0x55ff6814d21a]
======= Memory map: ========
55ff68142000-55ff69de2000 r-xp 00000000 08:06 47201879                   /home/vitis/Sandbox/wrf_cyclone/tc.exe
55ff69fe1000-55ff69fe5000 r--p 01c9f000 08:06 47201879                   /home/vitis/Sandbox/wrf_cyclone/tc.exe
55ff69fe5000-55ff6a031000 rw-p 01ca3000 08:06 47201879                   /home/vitis/Sandbox/wrf_cyclone/tc.exe
55ff6a031000-55ff6f71d000 rw-p 00000000 00:00 0
55ff70881000-55ff76de2000 rw-p 00000000 00:00 0                          [heap]
7f45b0000000-7f45b0021000 rw-p 00000000 00:00 0
7f45b0021000-7f45b4000000 ---p 00000000 00:00 0
7f45b55c9000-7f45c4cba000 rw-p 00000000 00:00 0
7f45c4cba000-7f45c4cd3000 r-xp 00000000 08:01 1081670                    /usr/local/lib/libz.so.1.2.8
7f45c4cd3000-7f45c4ed2000 ---p 00019000 08:01 1081670                    /usr/local/lib/libz.so.1.2.8
7f45c4ed2000-7f45c4ed3000 r--p 00018000 08:01 1081670                    /usr/local/lib/libz.so.1.2.8
7f45c4ed3000-7f45c4ed4000 rw-p 00019000 08:01 1081670                    /usr/local/lib/libz.so.1.2.8
7f45c4ed4000-7f45c4ed7000 r-xp 00000000 08:01 1438987                    /lib/x86_64-linux-gnu/libdl-2.24.so
7f45c4ed7000-7f45c50d6000 ---p 00003000 08:01 1438987                    /lib/x86_64-linux-gnu/libdl-2.24.so
7f45c50d6000-7f45c50d7000 r--p 00002000 08:01 1438987                    /lib/x86_64-linux-gnu/libdl-2.24.so
7f45c50d7000-7f45c50d8000 rw-p 00003000 08:01 1438987                    /lib/x86_64-linux-gnu/libdl-2.24.so
7f45c50d8000-7f45c53ac000 r-xp 00000000 08:01 1439954                    /lib/libhdf5.so.8.0.2
7f45c53ac000-7f45c55ab000 ---p 002d4000 08:01 1439954                    /lib/libhdf5.so.8.0.2
7f45c55ab000-7f45c55b0000 r--p 002d3000 08:01 1439954                    /lib/libhdf5.so.8.0.2
7f45c55b0000-7f45c55b6000 rw-p 002d8000 08:01 1439954                    /lib/libhdf5.so.8.0.2
7f45c55b6000-7f45c55b8000 rw-p 00000000 00:00 0
7f45c55b8000-7f45c55d5000 r-xp 00000000 08:01 1439960                    /lib/libhdf5_hl.so.8.0.2
7f45c55d5000-7f45c57d4000 ---p 0001d000 08:01 1439960                    /lib/libhdf5_hl.so.8.0.2
7f45c57d4000-7f45c57d5000 r--p 0001c000 08:01 1439960                    /lib/libhdf5_hl.so.8.0.2
7f45c57d5000-7f45c57d6000 rw-p 0001d000 08:01 1439960                    /lib/libhdf5_hl.so.8.0.2
7f45c57d6000-7f45c57e7000 rw-p 00000000 00:00 0
7f45c57e7000-7f45c597c000 r-xp 00000000 08:01 1438984                    /lib/x86_64-linux-gnu/libc-2.24.so
7f45c597c000-7f45c5b7c000 ---p 00195000 08:01 1438984                    /lib/x86_64-linux-gnu/libc-2.24.so
7f45c5b7c000-7f45c5b80000 r--p 00195000 08:01 1438984                    /lib/x86_64-linux-gnu/libc-2.24.so
7f45c5b80000-7f45c5b82000 rw-p 00199000 08:01 1438984                    /lib/x86_64-linux-gnu/libc-2.24.so
7f45c5b82000-7f45c5b86000 rw-p 00000000 00:00 0
7f45c5b86000-7f45c5bc4000 r-xp 00000000 08:01 927724                     /usr/lib/x86_64-linux-gnu/libquadmath.so.0.0.0
7f45c5bc4000-7f45c5dc3000 ---p 0003e000 08:01 927724                     /usr/lib/x86_64-linux-gnu/libquadmath.so.0.0.0
7f45c5dc3000-7f45c5dc4000 r--p 0003d000 08:01 927724                     /usr/lib/x86_64-linux-gnu/libquadmath.so.0.0.0
7f45c5dc4000-7f45c5dc5000 rw-p 0003e000 08:01 927724                     /usr/lib/x86_64-linux-gnu/libquadmath.so.0.0.0
7f45c5dc5000-7f45c5ddb000 r-xp 00000000 08:01 1438980                    /lib/x86_64-linux-gnu/libgcc_s.so.1
7f45c5ddb000-7f45c5fda000 ---p 00016000 08:01 1438980                    /lib/x86_64-linux-gnu/libgcc_s.so.1
7f45c5fda000-7f45c5fdb000 r--p 00015000 08:01 1438980                    /lib/x86_64-linux-gnu/libgcc_s.so.1
7f45c5fdb000-7f45c5fdc000 rw-p 00016000 08:01 1438980                    /lib/x86_64-linux-gnu/libgcc_s.so.1
7f45c5fdc000-7f45c60df000 r-xp 00000000 08:01 1438988                    /lib/x86_64-linux-gnu/libm-2.24.so
7f45c60df000-7f45c62de000 ---p 00103000 08:01 1438988                    /lib/x86_64-linux-gnu/libm-2.24.so
7f45c62de000-7f45c62df000 r--p 00102000 08:01 1438988                    /lib/x86_64-linux-gnu/libm-2.24.so
7f45c62df000-7f45c62e0000 rw-p 00103000 08:01 1438988                    /lib/x86_64-linux-gnu/libm-2.24.so
7f45c62e0000-7f45c6404000 r-xp 00000000 08:01 927727                     /usr/lib/x86_64-linux-gnu/libgfortran.so.3.0.0
7f45c6404000-7f45c6603000 ---p 00124000 08:01 927727                     /usr/lib/x86_64-linux-gnu/libgfortran.so.3.0.0
7f45c6603000-7f45c6604000 r--p 00123000 08:01 927727                     /usr/lib/x86_64-linux-gnu/libgfortran.so.3.0.0
7f45c6604000-7f45c6606000 rw-p 00124000 08:01 927727                     /usr/lib/x86_64-linux-gnu/libgfortran.so.3.0.0
7f45c6606000-7f45c66af000 r-xp 00000000 08:01 1439965                    /lib/libnetcdf.so.7.1.1
7f45c66af000-7f45c68ae000 ---p 000a9000 08:01 1439965                    /lib/libnetcdf.so.7.1.1
7f45c68ae000-7f45c68fc000 r--p 000a8000 08:01 1439965                    /lib/libnetcdf.so.7.1.1
7f45c68fc000-7f45c6900000 rw-p 000f6000 08:01 1439965                    /lib/libnetcdf.so.7.1.1
7f45c6900000-7f45c6904000 rw-p 00000000 00:00 0
7f45c6904000-7f45c696b000 r-xp 00000000 08:01 1439971                    /lib/libnetcdff.so.5.1.0
7f45c696b000-7f45c6b6a000 ---p 00067000 08:01 1439971                    /lib/libnetcdff.so.5.1.0
7f45c6b6a000-7f45c6b6b000 r--p 00066000 08:01 1439971                    /lib/libnetcdff.so.5.1.0
7f45c6b6b000-7f45c6b6c000 rw-p 00067000 08:01 1439971                    /lib/libnetcdff.so.5.1.0
7f45c6b6c000-7f45c6b8f000 r-xp 00000000 08:01 1438979                    /lib/x86_64-linux-gnu/ld-2.24.so
7f45c6ba5000-7f45c6d66000 rw-p 00000000 00:00 0
7f45c6d67000-7f45c6d8f000 rw-p 00000000 00:00 0
7f45c6d8f000-7f45c6d90000 r--p 00023000 08:01 1438979                    /lib/x86_64-linux-gnu/ld-2.24.so
7f45c6d90000-7f45c6d91000 rw-p 00024000 08:01 1438979                    /lib/x86_64-linux-gnu/ld-2.24.so
7f45c6d91000-7f45c6d92000 rw-p 00000000 00:00 0
7fffaf355000-7fffaf377000 rw-p 00000000 00:00 0                          [stack]
7fffaf38c000-7fffaf38e000 r--p 00000000 00:00 0                          [vvar]
7fffaf38e000-7fffaf390000 r-xp 00000000 00:00 0                          [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0                  [vsyscall]

Program received signal SIGABRT: Process abort signal.

Backtrace for this error:
#0  0x7f45c62fbd1d in ???
#1  0x7f45c62faf7d in ???
#2  0x7f45c581a05f in ???
#3  0x7f45c5819fff in ???
#4  0x7f45c581b429 in ???
#5  0x7f45c5857bff in ???
#6  0x7f45c585dfc5 in ???
#7  0x7f45c585e80d in ???
#8  0x55ff6816fd24 in ???
#9  0x55ff68170a31 in ???
#10  0x55ff68171ae7 in ???
#11  0x55ff6814d149 in ???
#12  0x7f45c58072e0 in ???
#13  0x55ff6814d219 in ???
#14  0xffffffffffffffff in ???
Aborted



Any idea about the cause of this problem ?

I compiled successfully with gfortran/gcc and first ran wrf without a bogus tc, no problem there.

Note that I first tried to use tc.exe from a wrf compilation with smpar and nesting, got that crash. Then tried wrf in serial and no nesting, result is the same.

Any help appreciated!
Thanks
lauryrenac
 
Posts: 1
Joined: Fri May 25, 2018 7:16 am

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