FATAL CALLED FROM FILE: <stdin> LINE: 1474

Any issues with the actual running of the WRF.

FATAL CALLED FROM FILE: <stdin> LINE: 1474

Postby jean2017 » Thu May 24, 2018 2:29 pm

Hi! I am new to WRF and have been trying out the sample cases. When I try to run a simulation for a another case I get the following message when running the real.exe:


taskid: 0 hostname: investigacion-OptiPlex-760
module_io_quilt_old.F 2931 T
Ntasks in X 1 , ntasks in Y 1
--- WARNING: traj_opt is zero, but num_traj is not zero; setting num_traj to zero.
--- NOTE: sst_update is 0, setting io_form_auxinput4 = 0 and auxinput4_interval = 0 for all domains
--- NOTE: sst_update is 0, setting io_form_auxinput4 = 0 and auxinput4_interval = 0 for all domains
--- NOTE: grid_fdda is 0 for domain 1, setting gfdda interval and ending time to 0 for that domain.
--- NOTE: both grid_sfdda and pxlsm_soil_nudge are 0 for domain 1, setting sgfdda interval and ending time to 0 for that domain.
--- NOTE: obs_nudge_opt is 0 for domain 1, setting obs nudging interval and ending time to 0 for that domain.
--- NOTE: grid_fdda is 0 for domain 2, setting gfdda interval and ending time to 0 for that domain.
--- NOTE: both grid_sfdda and pxlsm_soil_nudge are 0 for domain 2, setting sgfdda interval and ending time to 0 for that domain.
--- NOTE: obs_nudge_opt is 0 for domain 2, setting obs nudging interval and ending time to 0 for that domain.
--- NOTE: bl_pbl_physics /= 4, implies mfshconv must be 0, resetting
Need MYNN PBL for icloud_bl = 1, resetting to 0
--- ERROR: e_vert differs on grid ids 2 and 1. Set vert_refine_method or make e_vert consistent.
--- NOTE: RRTMG radiation is not used, setting: o3input=0 to avoid data pre-processing
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: <stdin> LINE: 1474
NOTE: 1 namelist settings are wrong. Please check and reset these options
-------------------------------------------
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0


This is the namelist.input file I used:


&time_control
run_days = 5,
run_hours = 0,
run_minutes = 0,
run_seconds = 0,
start_year = 2017, 2005, 2000,
start_month = 09, 08, 01,
start_day = 19, 28, 24,
start_hour = 00, 00, 12,
start_minute = 00, 00, 00,
start_second = 00, 00, 00,
end_year = 2017, 2005, 2000,
end_month = 09, 08, 01,
end_day = 24, 29, 25,
end_hour = 00, 00, 12,
end_minute = 00, 00, 00,
end_second = 00, 00, 00,
interval_seconds = 21600
input_from_file = .true.,.false.,.true.,
history_interval = 60, 60, 60,
frames_per_outfile = 24, 1000, 1000,
restart = .false.,
restart_interval = 5000,
io_form_history = 2
io_form_restart = 2
io_form_input = 2
io_form_boundary = 2
debug_level = 0
/

&domains
time_step = 180,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 2,
e_we = 50, 118, 94,
e_sn = 50, 103, 91,
e_vert = 50, 30, 30,
p_top_requested = 1000,
num_metgrid_levels = 32,
num_metgrid_soil_levels = 4,
dx = 10000, 10000, 3333.33,
dy = 10000, 10000, 3333.33,
grid_id = 1, 2, 3,
parent_id = 0, 1, 2,
vert_refine_method = 0,
i_parent_start = 1, 35, 30,
j_parent_start = 1, 23, 30,
parent_grid_ratio = 1, 3, 3,
parent_time_step_ratio = 1, 3, 3,
feedback = 1,
smooth_option = 0
/

&physics
mp_physics = 3, 3, 3,
ra_lw_physics = 1, 1, 1,
ra_sw_physics = 1, 1, 1,
radt = 30, 30, 30,
sf_sfclay_physics = 1, 1, 1,
sf_surface_physics = 2, 2, 2,
bl_pbl_physics = 1, 1, 1,
bldt = 0, 0, 0,
cu_physics = 1, 1, 0,
cudt = 5, 5, 5,
isfflx = 1,
ifsnow = 1,
icloud = 1,
surface_input_source = 3,
num_soil_layers = 4,
num_land_cat = 21,
sf_urban_physics = 0, 0, 0,
/

&fdda
/

&dynamics
w_damping = 0,
diff_opt = 1, 1, 1,
km_opt = 4, 4, 4,
diff_6th_opt = 0, 0, 0,
diff_6th_factor = 0.12, 0.12, 0.12,
base_temp = 290.
damp_opt = 0,
zdamp = 5000., 5000., 5000.,
dampcoef = 0.2, 0.2, 0.2
khdif = 0, 0, 0,
kvdif = 0, 0, 0,
non_hydrostatic = .true., .true., .true.,
moist_adv_opt = 1, 1, 1,
scalar_adv_opt = 1, 1, 1,
/

&bdy_control
spec_bdy_width = 5,
spec_zone = 1,
relax_zone = 4,
specified = .true., .false.,.false.,
nested = .false., .true., .true.,
/

&grib2
/

&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
/

Thanks in advance for any help you can provide!
jean2017
 
Posts: 2
Joined: Fri Jun 30, 2017 5:16 pm

Re: FATAL CALLED FROM FILE: <stdin> LINE: 1474

Postby BHajni » Tue May 29, 2018 2:14 am

Hi,


I'm not sure you can nest domains with different time periods. According to your namelist you have 2 domains. The first starts in 2017, the second in 2005. Also the number of vertical levels must be the same for all domains. Now the first is 40, the second in 30.

Look through the README.namelist.

Cheers,
Hajni
BHajni
 
Posts: 31
Joined: Sun Mar 10, 2013 11:50 am


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