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Nesting crash

PostPosted: Thu Apr 12, 2012 11:01 am
by pfeffer
I'm trying nesting for the first time, and wrf.exe keeps crashing. WPS
produced met_em files for both domains and real.exe works fine. When I
change max_dom =1 it runs, so its definitely a problem with the second
domain. I'm sure it's something wrong in my namelist, but I haven't
been able to figure out what it is. I reduced the timestep in the
smaller domain very very small, so it isn't that. If you have any
suggestions I appreciate them very much! The following is the message from the node that crashes:

WRF TILE 1 IS 44 IE 58 JS 35 JE 46
WRF NUMBER OF TILES = 1
d02 2008-04-25_00:00:00 call rk_step_prep
d02 2008-04-25_00:00:00 calling inc/HALO_EM_A_inline.inc
d02 2008-04-25_00:00:00 calling inc/PERIOD_BDY_EM_A_inline.inc
d02 2008-04-25_00:00:00 call rk_phys_bc_dry_1
d02 2008-04-25_00:00:00 call init_zero_tendency
d02 2008-04-25_00:00:00 calling inc/HALO_EM_PHYS_A_inline.inc
d02 2008-04-25_00:00:00 call phy_prep
d02 2008-04-25_00:00:00 DEBUG wrf_timetoa(): returning with str = [2008-04-25_00:00:00]
d02 2008-04-25_00:00:00 call radiation_driver
d02 2008-04-25_00:00:00 Top of Radiation Driver
d02 2008-04-25_00:00:00 itimestep = 1 , dt = 12.00000 , lw and sw options = 1 2
d02 2008-04-25_00:00:00 CALL rrtm
d02 2008-04-25_00:00:00 before CALL gsfcswrad
d02 2008-04-25_00:00:00 after CALL gsfcswrad
d02 2008-04-25_00:00:00 swrad_was selected
d02 2008-04-25_00:00:00 lw scheme being selected
d02 2008-04-25_00:00:00 call surface_driver
d02 2008-04-25_00:00:00 in MYJSFC
d02 2008-04-25_00:00:00 in NOAH DRV
d02 2008-04-25_00:00:00 call pbl_driver
d02 2008-04-25_00:00:00 in MYJPBL
[compute-26-3:29147] *** Process received signal ***
[compute-26-3:29147] Signal: Segmentation fault (11)
[compute-26-3:29147] Signal code: Address not mapped (1)
[compute-26-3:29147] Failing at address: 0x10
[compute-26-3:29147] *** End of error message ***

Below my namelist:

&time_control
run_days = 0,
run_hours = 00,
run_minutes = 01,
run_seconds = 00,
start_year = 2008, 2008, 2008,
start_month = 04, 04, 04,
start_day = 25, 25, 25,
start_hour = 00, 00, 00,
start_minute = 00, 00, 00,
start_second = 00, 00, 00,
end_year = 2008, 2008, 2008,
end_month = 04, 04, 04,
end_day = 27, 27, 27,
end_hour = 00, 00, 00,
end_minute = 00, 00, 00,
end_second = 00, 00, 00,
interval_seconds = 21600 ! 3600=1hr, 10800=3hr,21600=6hr
input_from_file = .true.,.true.,.true.,
history_interval = 1, 1, 1, 60, ! [m]
frames_per_outfile = 12, 12, 12,
restart = .false.,
restart_interval = 720, ! [min] 1440 = 1 restart/day
auxinput5_interval_m = 60, 60, 60 ! The two chem files have data every 60 minutes
io_form_history = 2
io_form_restart = 2
io_form_input = 2
io_form_boundary = 2
io_form_auxinput4 = 0
io_form_auxinput5 = 0 !For chemopt = 0, =0, otherwise=2
debug_level = 500
write_hist_at_0h_rst = .true.
/

&domains
time_step = 120, ! 27km=120;1km=3;3km=12; 9km=45
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 2,
e_we = 33,58,133
e_sn = 33,58,133
e_vert = 49, 49, 49,
p_top_requested = 5000,
num_metgrid_levels = 38, ! old ECMWF=22; new ECMWF=38; NCEP=27
num_metgrid_soil_levels = 4, !ECMWF=4; NCEP=2
dx = 27000, 9000, 3000, 1000,
dy = 27000, 9000, 3000, 1000,
grid_id = 1, 2, 3,
parent_id = 0, 1, 2,
i_parent_start = 1, 7, 7,
j_parent_start = 1, 7, 7,
parent_grid_ratio = 1, 3, 3,
parent_time_step_ratio = 1, 10, 10,
feedback = 1,
smooth_option = 1,
eta_levels = 1,0.9939000,0.9875000,0.9810000,0.9742000,0.9672000,0.9598000,0.9520000,
0.9438000,0.9351000,0.9256000,0.9158000,0.9038000,0.8878000,0.8678000,
0.8428000,0.8128000,0.7778000,0.7418000,0.7058000,0.6688000,0.6318000,
0.5938000,0.5553000,0.5164500,0.4774500,0.4386000,0.4001000,0.3621000,
0.3251000,0.2881000,0.2521000,0.2161000,0.1811000,0.1511000,0.1261000,
0.1061000,0.0901000,0.0781000,0.0683000,0.0588000,0.0501000,0.0419000,
0.0341000,0.0267000,0.0197000,0.0129000,0.0064000,0.0000000,
/

&physics
mp_physics = 2, 2, 2,
ra_lw_physics = 1, 1, 1,
ra_sw_physics = 2, 2, 2,
radt = 9, 9, 9,
bl_pbl_physics = 2, 2, 2, ! 1=YSU, 2=MYJ
sf_sfclay_physics = 2, 2, 2, ! dependent on bl_pbl_physics choice 1->1; 2->2; 3->3; 4->4; 5->1,2,5; 6->5; 7->1,7
sf_surface_physics = 2, 2, 2,
bldt = 0, 0, 0,
cu_physics = 3, 0, 0, !convective parameterization =1 9km, =0 3km
cudt = 0, 0, 0,
isfflx = 1,
ifsnow = 0,
icloud = 1,
surface_input_source = 1,
num_soil_layers = 4,
sf_urban_physics = 0,
maxiens = 1,
maxens = 3,
maxens2 = 3,
maxens3 = 16,
ensdim = 144,
cugd_avedx = 3,
cu_rad_feedback = .false., .false.,.false.,
mp_zero_out = 2,
progn = 1,
cu_diag = 1, ! 1 if cu_physics=3,5, otherwise 0
/

&chem
kemit = 5,
chem_opt = 0, 0, 0, 34 ! 0 to turn off chem
!emi_inname = wrfchemi_00z_d01,
emiss_inpt_opt = 101, 101, 101, !1=radm/sorgam; 101=cbmz/mosaic
emiss_opt = 4, 4, 4,!3=radm/sorgam; 4=cbmz/mosaic
bioemdt = 30, 30, 30,
photdt = 30, 30, 30,
chemdt = 2, 0.75, 0.25, ![min], should be = time step (which is in sec); 9 km=0.75; 3km=0.2; 1km=0.05; 0 makes it = to physics time step
io_style_emissions = 1, !1
chem_in_opt = 0, 0, 0,
phot_opt = 2, 2, 2,
gas_drydep_opt = 1, 1, 1,
aer_drydep_opt = 1, 1, 1,
bio_emiss_opt = 1, 1, 1,
dust_opt = 2, !For chemopt = 10, =2 For chemopt=301, =0
dmsemis_opt = 2,
seas_opt = 2, !For chemopt = 10, =2 For chemopt=301, =0
gas_bc_opt = 1, 1, 1,!101 for Houston
gas_ic_opt = 1, 1, 1,!101 for Houston
aer_bc_opt = 101, 101, 101, !101 for Houston
aer_ic_opt = 101, 101, 101, !101 for Houston
gaschem_onoff = 1, 1, 1,
aerchem_onoff = 1, 1, 1,
wetscav_onoff = 0, 0, 0, 1 !For chemopt = 0, =0, otherwise=1
cldchem_onoff = 0, 0, 0, 1 !For chemopt = 0, =0, otherwise=1
vertmix_onoff = 1, 1, 1,
chem_conv_tr = 0, 0, 0, 1!For chemopt = 0, =0, otherwise=1
biomass_burn_opt = 0, 0, 0,
plumerisefire_frq = 30, 30, 30,
aer_ra_feedback = 0, 0, 0, 1 !For chemopt = 0, =0, otherwise=1
have_bcs_chem = .false., .false., .false., !Uses MOZART boundary and initial conditions. Must run real.exe, mozbc, wrf.exe
aer_op_opt = 2, 2, 2,
/

&dynamics
rk_ord = 3,
time_step_sound = 5, 4, 4,
w_damping = 0,
diff_opt = 1,
km_opt = 4,
diff_6th_opt = 0, 0, 0,
diff_6th_factor = 0.12, 0.12, 0.12,
base_temp = 290.
damp_opt = 1,
zdamp = 5000., 5000., 5000.,
dampcoef = 0.2, 0.2, 0.2
khdif = 0, 0, 0,
kvdif = 0, 0, 0,
non_hydrostatic = .true., .true., .true.,
moist_adv_opt = 2, 2, 2,
scalar_adv_opt = 2, 2, 2,
chem_adv_opt = 2, 2, 2,
tracer_adv_opt = 2,
!tke_adv_opt = 2, 2, 2,
gwd_opt = 0,
/

&bdy_control
spec_bdy_width = 4,
spec_zone = 1,
relax_zone = 3,
specified = .true., .false.,.false.,
nested = .false., .true., .true.,
/

&grib2
/

&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
/

Thank you.